Photo by Bill Boyd

Find the best Lincoln County Hotels

Start date: Check-in selected.
To Date
End date: Check-out

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Lincoln County Accommodation: Most Popular Cities to Stay

Pejepscot Museum showing a house
HotelsHotels

Boothbay Harbor

Boothbay Harbor

Check prices for these dates

Tonight
4 Jan - 5 Jan
Tomorrow
5 Jan - 6 Jan
Next weekend
9 Jan - 11 Jan
In two weeks
16 Jan - 18 Jan

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Lincoln County hotels

Two Queen Marina Front | Exterior
Tugboat Inn

Tugboat Inn

Tugboat Inn
3.0 star property
Boothbay Harbor
9.0 out of 10, Wonderful, (1003)
"The room was comfortable, clean, and the staff were friendly. Thank you Tugboat Inn! "
United States
Michelle
Tugboat Inn
Daily buffet breakfast (USD 10 per person)
Flagship Inn and Suites

Flagship Inn and Suites

Flagship Inn and Suites
2.5 star property
Boothbay Harbor
8.0 out of 10, Very good, (1003)
"Staff was very nice and the room was spotless. It was comfortable and cozy and convenient. I would stay here again"
United States
Mary Jane
The price is Rp2.043.612
Rp2.637.984 total
includes taxes & fees
5 Jan - 6 Jan
Flagship Inn and Suites
Front of property
Cod Cove Inn, BW Signature Collection

Cod Cove Inn, BW Signature Collection

Cod Cove Inn, BW Signature Collection
2.5 star property
Edgecomb
9.0 out of 10, Wonderful, (502)
"The rooms were clean and the staff was so friendly. I like the close proximity to everything "
United States
Lorraine
The price is Rp1.823.192
Rp1.987.279 total
includes taxes & fees
5 Jan - 6 Jan
Cod Cove Inn, BW Signature Collection
Deluxe Room, 1 King Bed, Harbour View, Oceanfront | Water view
Harborage Inn on the Oceanfront

Harborage Inn on the Oceanfront

Harborage Inn on the Oceanfront
3.5 star property
Boothbay Harbor
9.6 out of 10, Exceptional, (223)
"Yes, the room was spotless and comfortable. Check in was easy. Breakfast was delicious and appeared right on time!"
United States
Valerie
The price is Rp2.950.123
Rp3.215.716 total
includes taxes & fees
8 Jan - 9 Jan
Harborage Inn on the Oceanfront
Outdoor pool, open 7:30 AM to 8 PM, pool umbrellas, pool loungers
Smuggler's Cove Inn

Smuggler's Cove Inn

Smuggler's Cove Inn
2.5 star property
East Boothbay
9.0 out of 10, Wonderful, (451)
"The rooms were lovely, the restaurant was amazing, the views spectacular the staff were wonderful."
United States
Jean
Smuggler's Cove Inn
Front of property
Harbour Towne Inn on the Waterfront

Harbour Towne Inn on the Waterfront

Harbour Towne Inn on the Waterfront
3.0 star property
Boothbay Harbor
9.6 out of 10, Exceptional, (78)
"Very nice comfortable room with friendly staff and excellent breakfast."
United States
Robert
Harbour Towne Inn on the Waterfront
Triple Queen Suite Overlooking Whale Park | Balcony view
Fishermans Wharf Inn

Fishermans Wharf Inn

Fishermans Wharf Inn
2.5 star property
Boothbay Harbor
8.6 out of 10, Excellent, (891)
"Amazing stay right on the harbor!! "
United States
David
Fishermans Wharf Inn
Windward Premium Harbor View King | Premium bedding, Tempur-Pedic beds, minibar, iron/ironing board
Topside Inn

Topside Inn

Topside Inn
3.0 star property
Boothbay Harbor
10.0 out of 10, Exceptional, (88)
"The breakfast was superb and the property is gorgeous! "
United States
Heather
Topside Inn
2 restaurants, breakfast, lunch, dinner served; local cuisine
Spruce Point Inn

Spruce Point Inn

Spruce Point Inn
3.5 star property
Boothbay Harbor
8.8 out of 10, Excellent, (397)
"Beautiful grounds and views"
United States
Patricia
Spruce Point Inn
Terrace/patio
Admirals Quarters Inn

Admirals Quarters Inn

Admirals Quarters Inn
2.0 star property
Boothbay Harbor
9.4 out of 10, Exceptional, (30)
"Amazing property and the staff was so nice! "
United States
Kelly
Admirals Quarters Inn
Outdoor pool, open 8:00 AM to 8:00 PM, pool loungers
Linekin Bay Resort

Linekin Bay Resort

Linekin Bay Resort
3.0 star property
Boothbay Harbor
9.2 out of 10, Wonderful, (203)
"Great place out of the way but also not far from town,loved it!"
United States
Richard
Linekin Bay Resort
Premium Townhome, 3 Bedrooms, Kitchen, River View | Private kitchen | Coffee/tea maker
Sheepscot Harbour Village Resort

Sheepscot Harbour Village Resort

Sheepscot Harbour Village Resort
2.5 star property
Edgecomb
9.0 out of 10, Wonderful, (232)
"We were surprised that we couldn’t get a hot coffee in the mornings. They never came to make up our room. The towels were like sandpaper. The bed and comforter were great. Though they have a restaurant they couldn’t even give us real milk for the in room coffee maker, just lightener! I don’t think I’d stay again."
United States
Vicki
Sheepscot Harbour Village Resort
Oceanfront Deluxe King w/ porch | Beach/ocean view
Bluebird Ocean Point Inn

Bluebird Ocean Point Inn

Bluebird Ocean Point Inn
3.0 star property
Ocean Point
8.8 out of 10, Excellent, (556)
"Staff was super friendly! Will stay again if in the area."
United States
Jennifer
Bluebird Ocean Point Inn
Aerial view
Newagen Seaside Inn

Newagen Seaside Inn

Newagen Seaside Inn
3.5 star property
Southport
9.4 out of 10, Exceptional, (341)
"Location was beautiful and food was great. "
United States
Gianina
Newagen Seaside Inn
Executive Room, 1 King Bed, Balcony, Ocean View | Terrace/patio
Greenleaf Inn

Greenleaf Inn

Greenleaf Inn
2.0 star property
Boothbay Harbor
9.0 out of 10, Wonderful, (14)
"Our host is the best! Such a beautiful property. "
United States
Lee
Greenleaf Inn
Front of property
Mid-Town Motel

Mid-Town Motel

Mid-Town Motel
2.0 star property
Boothbay Harbor
8.8 out of 10, Excellent, (213)
"Great retro vibe, true travel motel"
United States
Kimberly
Mid-Town Motel
Sherman Zwicker | Desk, iron/ironing board, free WiFi, bed sheets
The Thistle Inn

The Thistle Inn

The Thistle Inn
2.0 star property
Boothbay Harbor
7.6 out of 10, Good, (86)
"Beautiful Boothbay Harbor!"
United States
Charles
The Thistle Inn
Exterior
Boothbay Harbor Inn

Boothbay Harbor Inn

Boothbay Harbor Inn
2.5 star property
Boothbay Harbor
8.4 out of 10, Very good, (1000)
"Great location just across the walking bridge from the quaint village of Boothbay Harbor."
United States
Mark
Boothbay Harbor Inn
View from property
Hawks House Inn

Hawks House Inn

Hawks House Inn
2.5 star property
Walpole
9.8 out of 10, Exceptional, (242)
"Nice B&B! "
United States
Edward
Hawks House Inn
View from property
Clary Lake Bed and Breakfast

Clary Lake Bed and Breakfast

Clary Lake Bed and Breakfast
3.0 star property
Jefferson
9.8 out of 10, Exceptional, (111)
"Breakfast was great. Room comfortable cozy"
United States
Kathleen
Clary Lake Bed and Breakfast
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Top Lincoln County Hotel Reviews

Flagship Inn and Suites

Flagship Inn and Suites

10/10 Excellent
"Customer service was amazing the gentleman that checked us in helped us greatly the room was clean and everything was how it should be I would recommend this hotel to anyone including my closest friends and family the price point was very reasonable and the breakfast was the best hotel breakfast I have had since before Covid if I travel to Boothbay Harbor this is the only hotel I’ll stay at!!!"
paul 1-night trip
Posted 6 days ago
Flagship Inn and Suites

Explore a world of travel with Expedia