Two manatees resting in shallow water with aquatic plants.

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Check prices for these dates

Next weekend
23 Oct - 25 Oct
In two weeks
30 Oct - 1 Nov

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Our top choices for Indian Waters hotels

A bar area with a wooden counter, seating, ceiling fans, and a view of the water.

1. PaddleTail Waterfront Lodge, Trademark Collection by Wyndham

PaddleTail Waterfront Lodge, Trademark Collection by Wyndham
2.5 star property
3.2 km from Indian Waters
8.8 out of 10, Excellent, (1,578 reviews)
"Great location 👌"
United States
Stephen
The price is Rp2.244.044
Rp2.491.050 total
includes taxes & fees
25 Oct - 26 Oct
PaddleTail Waterfront Lodge, Trademark Collection by Wyndham
A hotel entrance with a glass door, a hallway leading to the interior, and a doormat with a motivational message.

2. Hampton Inn Crystal River, FL

Hampton Inn Crystal River, FL
2.5 star property
6.2 km from Indian Waters
9.4 out of 10, Exceptional, (1,002 reviews)
"Everyone and everything was wonderful! We would stay here again."
United States
Jaysen
The price is Rp2.119.375
Rp2.352.506 total
includes taxes & fees
24 Oct - 25 Oct
Hampton Inn Crystal River, FL
A modern restaurant with high ceilings, blue and grey walls, and a variety of seating options including tables, booths, and chairs.

3. Holiday Inn Express Crystal River by IHG

Holiday Inn Express Crystal River by IHG
2.5 star property
5.7 km from Indian Waters
9.2 out of 10, Wonderful, (1,000 reviews)
"Best breakfast ive seen for this price range hotel"
United States
Mark
The price is Rp1.856.781
Rp2.061.027 total
includes taxes & fees
15 Nov - 16 Nov
Holiday Inn Express Crystal River by IHG
A clear swimming pool with a deck, a covered pavilion, and a view of a lake and distant buildings.

4. King's Bay Lodge

King's Bay Lodge
2.5 star property
Springs at Kings Bay, 3.7 km from Indian Waters
9.6 out of 10, Exceptional, (455 reviews)
"Stayed twice in one week. Will return again. Great place in a great area !"
United States
Dina
The price is Rp1.792.006
Rp2.389.700 total
includes taxes & fees
18 Oct - 19 Oct
King's Bay Lodge
A hotel room with a large bed, a desk, a chair, a television, a painting of a sunset over water, and a door.

5. Days Inn by Wyndham Crystal River

Days Inn by Wyndham Crystal River
2.0 star property
1.5 km from Indian Waters
7.6 out of 10, Good, (1,003 reviews)
"Clean and great location"
United States
Steven
The price is Rp1.097.806
Rp1.218.565 total
includes taxes & fees
1 Nov - 2 Nov
Days Inn by Wyndham Crystal River
A modern living room with a sofa, a small round table, and a staircase leading to another level.

6. Plantation Resort on Crystal River

Plantation Resort on Crystal River
2.0 star property
5.5 km from Indian Waters
7.6 out of 10, Good, (304 reviews)
"Excellent accommodation especially for the price."
United States
Darrin
The price is Rp1.678.997
Rp1.863.758 total
includes taxes & fees
18 Oct - 19 Oct
Plantation Resort on Crystal River
A garden pathway leading to a gated entrance with lush greenery and hanging moss.

7. Retreat at Crystal Manatee

Retreat at Crystal Manatee
2.5 star property
Springs at Kings Bay, 3.9 km from Indian Waters
9.4 out of 10, Exceptional, (440 reviews)
"Lovely hotel & restaurant, chic."
United States
Lorraine
The price is Rp2.780.335
Rp3.086.172 total
includes taxes & fees
20 Oct - 21 Oct
Retreat at Crystal Manatee
A hotel reception area with a wooden counter, coffee machines, and framed artwork on the wall.

8. Quality Inn Crystal River

Quality Inn Crystal River
2.5 star property
1.4 km from Indian Waters
7.2 out of 10, Good, (954 reviews)
"Will not stay here"
United States
Johnny
The price is Rp1.045.247
Rp1.160.224 total
includes taxes & fees
11 Nov - 12 Nov
Quality Inn Crystal River
An outdoor seating area with tables and chairs, a pathway, and a view of a pool.

9. The Port Hotel & Marina

The Port Hotel & Marina
2.0 star property
Springs at Kings Bay, 5 km from Indian Waters
7.8 out of 10, Good, (1,000 reviews)
"Clean rooms, friendly and helpful staff."
United States
JESSIE
The price is Rp1.444.684
Rp1.603.682 total
includes taxes & fees
17 Nov - 18 Nov
The Port Hotel & Marina
Room

10. Econo Lodge Crystal River

Econo Lodge Crystal River
2.0 star property
1.5 km from Indian Waters
6.6 out of 10, (727 reviews)
"the bed was super clean but the bathtub needs some renovation."
United States
Cristiano
The price is Rp842.762
Rp935.465 total
includes taxes & fees
15 Nov - 16 Nov
Econo Lodge Crystal River
A compact kitchen with white cabinets, a microwave, a refrigerator, and a dining area with a table and chairs.

11. Three Sisters Cottages

Three Sisters Cottages
4.0 star property
3.9 km from Indian Waters
9.6 out of 10, Exceptional, (7 reviews)
"Will stay again"
United States
Leslie
The price is Rp3.148.119
Rp3.494.412 total
includes taxes & fees
22 Oct - 23 Oct
Three Sisters Cottages
A table set with a puzzle, books, a candle, and snacks on a balcony with a view of a river and palm trees.

12. Crystal River Lullaby B&B

Crystal River Lullaby B&B
4.0 star property
9.7 km from Indian Waters
10.0 out of 10, Exceptional, (53 reviews)
"The people were very friendly and helpful. We had a wonderful stay."
United States
Vincent
The price is Rp4.270.141
Rp4.739.758 total
includes taxes & fees
20 Oct - 21 Oct
Crystal River Lullaby B&B
A spacious living area with a red and white checkered sofa, a wooden coffee table, and a dining table with chairs. A large plant is in the corner, and the kitchen is visible in the background.

13. NEW Listing Discount! • Near Manatees & Springs

NEW Listing Discount! • Near Manatees & Springs
4.0 star property
5.9 km from Indian Waters
10.0 out of 10, Exceptional, (3 reviews)
"Great location, clean and cute."
United States
samantha
The price is Rp1.573.757
Rp4.948.465 total
includes taxes & fees
18 Oct - 19 Oct
NEW Listing Discount! • Near Manatees & Springs
A bar area with wooden ceiling, bar stools, and a counter with various bottles.

14. Rodeway Inn Homosassa

Rodeway Inn Homosassa
2.0 star property
13.6 km from Indian Waters
7.2 out of 10, Good, (1,001 reviews)
"The hotel was excellent! The service was outstanding, the room was clean, and everyone was friendly, welcoming, and helpful. I had a wonderful experience and would definitely recommend this hotel to others."
United States
Maria
The price is Rp1.049.373
Rp1.200.680 total
includes taxes & fees
25 Oct - 26 Oct
Rodeway Inn Homosassa
A bedroom with a large bed, a ceiling fan, a sliding glass door to a balcony, a bedside table with a lamp, and a small shelf with decorative items.

15. The Happy Haven Near Manatee Tours

The Happy Haven Near Manatee Tours
4.0 star property
5.9 km from Indian Waters
8.8 out of 10, Excellent, (3 reviews)
"Cute little three bedroom/1-bath pet friendly home that had everything we needed for our stay. Nicely decorated and the beds were very comfortable."
United States
Laura
The price is Rp1.501.411
Rp5.250.578 total
includes taxes & fees
18 Oct - 19 Oct
The Happy Haven Near Manatee Tours
A hotel with a yellow facade, a sign reading "Comfort Suites," and a covered entrance area.

16. Comfort Suites Dunnellon near Rainbow Springs

Comfort Suites Dunnellon near Rainbow Springs
2.5 star property
23 km from Indian Waters
8.8 out of 10, Excellent, (1,007 reviews)
"Great breakfast, very helpful staff, atmospheric in the pool area-adjacent to woodsy area birds songs, relaxing. Plenty of parking."
United States
Patricia
The price is Rp1.509.483
Rp1.683.074 total
includes taxes & fees
8 Nov - 9 Nov
Comfort Suites Dunnellon near Rainbow Springs
A living room with a blue sofa, a yellow cabinet, and a ceiling fan.

17. Pet-Friendly Crystal River Retreat - Near Manatees & Golf

Pet-Friendly Crystal River Retreat - Near Manatees & Golf
3.0 star property
5.9 km from Indian Waters
10.0 out of 10, Exceptional, (1 review)
"The home was great. It was clean, well stocked, great comfy beds. The back yard was great. The yard was very nicely decorated. A fire pit, chairs..... just wonderful. The hosts were very kind. Always answering quickly. Very smooth check in and out. When we return to the area, we will definitely stay here."
United States
Nancy
The price is Rp1.525.895
Rp4.895.339 total
includes taxes & fees
19 Oct - 20 Oct
Pet-Friendly Crystal River Retreat - Near Manatees & Golf
A hotel room with two beds, a desk, a chair, a TV, and a large window.

18. Holiday Inn Express Hotel & Suites Inverness by IHG

Holiday Inn Express Hotel & Suites Inverness by IHG
2.5 star property
20.9 km from Indian Waters
9.0 out of 10, Wonderful, (1,001 reviews)
"Clean and close to restaurants and shopping."
United States
Timothy
The price is Rp1.668.234
Rp1.851.740 total
includes taxes & fees
25 Oct - 26 Oct
Holiday Inn Express Hotel & Suites Inverness by IHG
A gazebo with a wooden roof and white columns, surrounded by outdoor tables and chairs, set in a park with trees and a white fence in the background.

19. Quality Inn Conference Center at Citrus Hills

Quality Inn Conference Center at Citrus Hills
2.5 star property
19.2 km from Indian Waters
8.2 out of 10, Very good, (1,004 reviews)
"Only stayed a night but was good place"
United States
Tabitha
The price is Rp1.168.840
Rp1.297.413 total
includes taxes & fees
25 Oct - 26 Oct
Quality Inn Conference Center at Citrus Hills
A covered patio with a table and chairs, large windows, and a view of the surrounding buildings.

20. 2 Mi to Three Sisters Springs: Home w/ Patio

2 Mi to Three Sisters Springs: Home w/ Patio
3.0 star property
2.9 km from Indian Waters
The price is Rp1.739.986
Rp4.976.001 total
includes taxes & fees
21 Oct - 22 Oct
2 Mi to Three Sisters Springs: Home w/ Patio
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Where to stay in Indian Waters

Find the best Indian Waters areas for the activities you enjoy most.
Two manatees on a sandy seabed with a diver in the background.
Photo by Madison Walker
Open Photo by Madison Walker

Springs at Kings Bay

While visiting Springs at Kings Bay, you might make a stop by sights like Three Sisters Springs and Hunter Spring Park.

A calm river with clear water, surrounded by dense greenery and a clear blue sky.

Crystal Shores

While Crystal Shores may not have many sights to explore, venturing just a little farther will lead you to top things to see and do like Hunter Spring Park and Chassahowitzka National Wildlife Refuge.

A house by a lake with boats and a dock.

Dixie Shores

When in Dixie Shores, you can plan a visit to Fort Island Trail Park and Crystal River Archaeological State Park, some noteworthy sights in the nearby area.

A serene river surrounded by tall trees and dense foliage.

Woodland Estates

When in Woodland Estates, you can plan a visit to Crystal River Archaeological State Park and Crystal River Watersports Marina, some noteworthy sights in the nearby area.

A calm river with grassy banks and a cloudy sky.

Woods N Waters

When in Woods N Waters, you can plan a visit to Fort Island Trail Park and Crystal River Archaeological State Park, some noteworthy sights in the nearby area.

Top Indian Waters Hotel Reviews

WoodSpring Suites Inverness

WoodSpring Suites Inverness

10/10 Excellent
"Clean, comfortable and well kept rooms"
Bernard 4-night trip
Posted 1 day ago
WoodSpring Suites Inverness

Frequently asked questions

What is Indian Waters like?
Travellers will be sure to find plenty to entertain them in Crystal River's Indian Waters neighbourhood.
How many hotels will I find in the Indian Waters area?
If you're searching for places to stay in Crystal River, Expedia has something to meet your needs with 27 Indian Waters hotels and other accommodation options to choose from.
If I need to cancel my hotel reservation in Indian Waters, will I receive a refund?
Yes, you'll find most hotel room reservations are refundable provided that you cancel before the hotel's cancellation deadline, which is usually within 24-48 hours of your arrival date. If your reservation is non-refundable, you might be able to still cancel and be given a refund within a 24-hour period of booking. Add your dates and click on "Search", then you can filter by "fully refundable" to view top deals in Indian Waters.
What is there to do around this Crystal River neighbourhood?
Yulee Sugar Mill Ruins, Crystal River Archaeological State Park and Crystal River Watersports Marina are just a few of the places to visit in and around Indian Waters. While you're out sightseeing, Fort Island Trail Park and Hunter Spring Park are a couple of additional sights to visit in Crystal River.