Search Hotels in Mission Bay, San Diego

Start date: Check-in selected.
To Date
End date: Check-out

    Change your mind

    Book hotels with free cancellation

    Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

    Be picky

    Search almost a million properties worldwide

Check prices for these dates

Tonight
25 Oct - 26 Oct
Tomorrow
26 Oct - 27 Oct
Next weekend
31 Oct - 2 Nov
In two weeks
7 Nov - 9 Nov

Filter by

Guest rating
Guest rating
Star rating

Top Trending Hotels Near Mission Bay, San Diego

2 outdoor pools, a heated pool, pool loungers
The Dana on Mission Bay
The Dana on Mission Bay
3.5 star property
8.8 out of 10, Excellent, (3806)
"Such a beautiful resort style hotel with great staff!"
United States
Madelyn
The price is Rp2.473.698
Rp3.175.465 total
includes taxes & fees
23 Nov - 24 Nov
The Dana on Mission Bay
Exterior
Hyatt Regency Mission Bay Spa and Marina
Hyatt Regency Mission Bay Spa and Marina
4.0 star property
8.4 out of 10, Very good, (1557)
"Clean rooms great view amazing pool and we loved the breakfast "
United States
ad
The price is Rp2.805.738
Rp4.103.467 total
includes taxes & fees
31 Oct - 1 Nov
Hyatt Regency Mission Bay Spa and Marina
Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)
San Diego Mission Bay Resort
San Diego Mission Bay Resort
4.0 star property
8.4 out of 10, Very good, (1284)
"Very clean resort"
United States
Jesse
The price is Rp3.635.838
Rp4.927.631 total
includes taxes & fees
27 Oct - 28 Oct
San Diego Mission Bay Resort
Property grounds
Paradise Point Resort & Spa
Paradise Point Resort & Spa
4.0 star property
8.6 out of 10, Excellent, (2297)
"Lovely grounds, excellent service "
United States
Erin
The price is Rp2.855.544
Rp4.122.775 total
includes taxes & fees
2 Nov - 3 Nov
Paradise Point Resort & Spa
Terrace/patio
Wyndham San Diego Bayside
Wyndham San Diego Bayside
4.0 star property
8.4 out of 10, Very good, (5996)
"Enjoyed our stay very much."
United States
David
The price is Rp2.243.760
Rp3.082.986 total
includes taxes & fees
28 Oct - 29 Oct
Wyndham San Diego Bayside
Outdoor pool
Hard Rock Hotel San Diego
Hard Rock Hotel San Diego
4.0 star property
9.0 out of 10, Wonderful, (3026)
"Very good place to stay"
United Kingdom
Adam
The price is Rp2.400.400
Rp3.547.136 total
includes taxes & fees
23 Nov - 24 Nov
Hard Rock Hotel San Diego
Rooftop terrace
Palihotel San Diego Gaslamp Quarter
Palihotel San Diego Gaslamp Quarter
4.0 star property
8.6 out of 10, Excellent, (1949)
"Clean room, friendly staff, comfortable bed. "
United States
Shane
The price is Rp2.071.930
Rp2.402.309 total
includes taxes & fees
23 Nov - 24 Nov
Palihotel San Diego Gaslamp Quarter
Suite, 2 Queen Beds, Non Smoking, Refrigerator (with Sofabed) | Premium bedding, in-room safe, desk, laptop workspace
Best Western Plus Marina Gateway Hotel
Best Western Plus Marina Gateway Hotel
3.5 star property
9.2 out of 10, Wonderful, (3338)
"Nice place to stay !"
United States
Soundararaj
The price is Rp2.077.076
Rp2.288.835 total
includes taxes & fees
2 Nov - 3 Nov
Best Western Plus Marina Gateway Hotel
Exterior
Loews Coronado Bay Resort
Loews Coronado Bay Resort
4.0 star property
8.8 out of 10, Excellent, (1048)
"Beautiful quiet hotel."
United States
Lori
The price is Rp3.303.798
Rp4.422.620 total
includes taxes & fees
27 Oct - 28 Oct
Loews Coronado Bay Resort
Garden
Legacy Resort Hotel & Spa
Legacy Resort Hotel & Spa
4.0 star property
9.2 out of 10, Wonderful, (2910)
"Love this hotel. "
United States
Dana
The price is Rp2.674.582
Rp3.074.297 total
includes taxes & fees
27 Oct - 28 Oct
Legacy Resort Hotel & Spa
Serves dinner and happy hour
The Horton Grand, Downtown/Gaslamp Quarter
The Horton Grand, Downtown/Gaslamp Quarter
3.5 star property
9.0 out of 10, Wonderful, (2619)
"Very nice location and rooms. "
United States
David
The Horton Grand, Downtown/Gaslamp Quarter
Lobby
Gaslamp Plaza Suites
Gaslamp Plaza Suites
3.5 star property
8.8 out of 10, Excellent, (1007)
"Had a great stay "
United States
Robert
The price is Rp1.876.026
Rp2.133.980 total
includes taxes & fees
2 Nov - 3 Nov
Gaslamp Plaza Suites
Lobby
El Cordova Hotel on Coronado Island
El Cordova Hotel on Coronado Island
3.5 star property
8.8 out of 10, Excellent, (1004)
"Good location! "
United States
Amanda
The price is Rp2.321.292
Rp3.055.930 total
includes taxes & fees
10 Nov - 11 Nov
El Cordova Hotel on Coronado Island
Front of property
The Sofia Hotel
The Sofia Hotel
3.5 star property
8.4 out of 10, Very good, (1604)
"I loved the stay here, highly recommended "
United States
Tanya
The Sofia Hotel
Property entrance
The Bristol Hotel San Diego
The Bristol Hotel San Diego
3.5 star property
8.4 out of 10, Very good, (1398)
"Great downtown location. Very friendly staff. "
United States
Hillary
The Bristol Hotel San Diego
Outdoor pool, a heated pool
Days Inn by Wyndham San Diego Hotel Circle
Days Inn by Wyndham San Diego Hotel Circle
3.0 star property
8.0 out of 10, Very good, (2361)
"We loved our stay, great price, very clean and excellent location! "
United States
Brenda
The price is Rp1.538.175
Rp1.768.055 total
includes taxes & fees
28 Oct - 29 Oct
Days Inn by Wyndham San Diego Hotel Circle
Exterior
La Pensione Hotel
La Pensione Hotel
3.0 star property
8.6 out of 10, Excellent, (1905)
"Great place to stay. No frills but great area. "
United States
Keelan
La Pensione Hotel
Standard Room, 1 King Bed, Smoking | Desk, laptop workspace, iron/ironing board, free WiFi
Days Inn by Wyndham San Diego-East/El Cajon
Days Inn by Wyndham San Diego-East/El Cajon
2.0 star property
7.6 out of 10, Good, (1001)
"Place was nice and comfy. Decent stay at a very genuine price. "
Canada
Siddarth
The price is Rp1.296.948
Rp1.429.171 total
includes taxes & fees
23 Nov - 24 Nov
Days Inn by Wyndham San Diego-East/El Cajon
Reception
Kings Inn San Diego
Kings Inn San Diego
2.5 star property
8.8 out of 10, Excellent, (3480)
"Great place to stay!"
United States
Melissa
Kings Inn San Diego
Front of property
Hotel Palmeras Chula Vista
Hotel Palmeras Chula Vista
2.0 star property
7.2 out of 10, Good, (1932)
"Good hotel "
United States
Nubia
The price is Rp1.196.838
Rp1.316.522 total
includes taxes & fees
2 Nov - 3 Nov
Hotel Palmeras Chula Vista
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

Gaslamp Quarter featuring a bar, night scenes and street scenes

Gaslamp Quarter

San Diego’s historic heart has shed its seedy past to emerge as one of the city’s premier dining, shopping and entertainment hubs.

Pacific Beach Park showing a beach

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

Belmont Park featuring a park and rides

Mission Beach

If you're spending some time in Mission Beach, Mission Bay and Mission Beach are top sights worth seeing.

Ocean Beach

Ocean Beach is beloved for its stunning beaches. Take some time to explore sights in the area like Ocean Beach Pier and Dog Beach.

Top Mission Bay Hotel Reviews

Courtyard by Marriott San Diego Downtown Little Italy

Courtyard by Marriott San Diego Downtown Little Italy

10/10 Excellent
"It was nice"
Samquavious 3-night trip
Posted 2 days ago
Courtyard by Marriott San Diego Downtown Little Italy

Explore a world of travel with Expedia

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.
What's a favourite hotel to stay in Mission Bay?
Based on Expedia customer reviews, Paradise Point Resort & Spa is the highest ranked property in Mission Bay. This resort offers a marina and 5 outdoor pools. Other favourite options in the area include San Diego Mission Bay Resort and Hyatt Regency Mission Bay Spa and Marina.
How many hotels should I expect to find in the Mission Bay area?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.
What is there to do around this San Diego neighbourhood?
Enjoy a stroll along the shore at Ski Beach, Mission and Pacific Beaches and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighbourhood. Don't miss favourite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot and Hotel Circle. When you're sightseeing in San Diego, Bahia Point Beach and Bay City Brewing Co. are also worth a stop.