What is Mission Bay like?

You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.

What's a favourite hotel to stay in Mission Bay?

Based on our traveller data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort offers a marina and 5 outdoor pools. Other good options for your stay in the neighbourhood include The Dana on Mission Bay and Hyatt Regency Mission Bay Spa and Marina .

How many hotels should I expect to find in the Mission Bay area?

If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.

If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?

Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.

What is there to do around this San Diego neighbourhood?

Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighbourhood. Mission Beach, Bahia Point Beach and Bay City Brewing Co. are just a few of the places to visit in and around Mission Bay. When you're sightseeing in San Diego, Sail Bay and Mission Bay Golf Course are also worth a stop.

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Dates

May 2026

June 2026

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Our top choices for Mission Bay hotels

Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)

San Diego Mission Bay Resort

Mission Bay

Valerie

Rp5.248.126 total

includes taxes & fees

3 May - 4 May

3 outdoor pools, pool cabanas (surcharge), pool umbrellas

Hyatt Regency Mission Bay Spa and Marina

Mission Bay

Donald

Rp4.258.492 total

includes taxes & fees

10 May - 11 May

5 outdoor pools, a heated pool, pool umbrellas, pool loungers

Paradise Point Resort & Spa

Mission Bay

Rolando

Rp5.220.042 total

includes taxes & fees

10 May - 11 May

2 outdoor pools, a heated pool, pool loungers

The Dana on Mission Bay

Mission Bay

Brandon

Rp3.940.987 total

includes taxes & fees

28 Apr - 29 Apr

Studio Suite, 1 King Bed with Sofa bed, Balcony | View from room

Sheraton San Diego Resort

6 km from Mission Bay

Gregory

Rp4.218.298 total

includes taxes & fees

25 May - 26 May

Studio 6 Suites San Ysidro, CA -San Diego South Bay

30.1 km from Mission Bay

Erik

Rp1.500.761 total

includes taxes & fees

3 May - 4 May

Room, 2 Double Beds, Non Smoking | Free WiFi, bed sheets, alarm clocks

Brisa Pacific Hotel Encinitas

32 km from Mission Bay

Christopher

Rp1.936.279 total

includes taxes & fees

29 Apr - 30 Apr

Down duvets, Select Comfort beds, desk, laptop workspace

Ramada by Wyndham San Diego Poway Miramar

24.7 km from Mission Bay

Ruffa Regina

Rp1.756.841 total

includes taxes & fees

27 Apr - 28 Apr

Best Western Americana Inn

28.6 km from Mission Bay

Nicole

Rp2.397.226 total

includes taxes & fees

3 May - 4 May

Bay Club Hotel & Marina

6.8 km from Mission Bay

Lawrence

Rp2.658.670 total

includes taxes & fees

5 May - 6 May

Breakfast, lunch, dinner served; Mediterranean cuisine

Bahia Resort Hotel

Central Mission Beach, 2.3 km from Mission Bay

samantha

Rp4.504.522 total

includes taxes & fees

29 Apr - 30 Apr

GreenTree Inn San Diego Mission Bay

Pacific Beach, 3 km from Mission Bay

Danielle

Rp2.069.306 total

includes taxes & fees

7 May - 8 May

Pleasant Inn

8 km from Mission Bay

Laurent

Rp1.848.520 total

includes taxes & fees

3 May - 4 May

Wyndham Garden San Diego Near SeaWorld

2.6 km from Mission Bay

Andrea

Rp2.356.660 total

includes taxes & fees

27 Apr - 28 Apr

Holiday Inn Express San Diego Airport - Old Town by IHG

4.8 km from Mission Bay

Joey L

Rp2.792.346 total

includes taxes & fees

30 Apr - 1 May

3 restaurants, breakfast, lunch, dinner served; Regional cuisine

Wyndham San Diego Bayside

8 km from Mission Bay

Regina

Rp4.175.276 total

includes taxes & fees

28 Apr - 29 Apr

Old Town Western Inn & Suites

Old Town San Diego, 4 km from Mission Bay

Juan

Rp2.025.128 total

includes taxes & fees

27 Apr - 28 Apr

Ocean Beach Hotel

Ocean Beach, 4.2 km from Mission Bay

Hyo seon

Rp3.495.592 total

includes taxes & fees

28 Apr - 29 Apr

Standard Room, 2 Queen Beds, Non Smoking, Microwave | Desk, blackout curtains, iron/ironing board, cots/infant beds

Best Western Yacht Harbor Hotel

5.6 km from Mission Bay

Jeffrey

Rp2.510.782 total

includes taxes & fees

27 Apr - 28 Apr

Old Town Inn

3.5 km from Mission Bay

Rachel

Rp3.065.039 total

includes taxes & fees

7 May - 8 May

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Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

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Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

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