An aerial view of a rural landscape with fields, a small town, and distant mountains.

Find hotels in Isahaya from Rp796.766

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Check prices for these dates

Tonight
21 Sept - 22 Sept
Tomorrow
22 Sept - 23 Sept
This weekend
25 Sept - 27 Sept
Next weekend
2 Oct - 4 Oct

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Our top choices for Isahaya hotels

1. Super Hotel Nagasaki Isahaya Natural Hot Spring

Super Hotel Nagasaki Isahaya Natural Hot Spring
Isahaya
Japan
KITANO
Rp1.155.719
Rp1.271.291 total
27 Sept - 28 Sept
Super Hotel Nagasaki Isahaya Natural Hot Spring

2. Tennen Onsen Hotel Kinshai

Tennen Onsen Hotel Kinshai
Isahaya
Japan
HIROKI
Rp1.018.753
Rp1.120.628 total
23 Sept - 24 Sept
Tennen Onsen Hotel Kinshai

3. Hotel Flags Ishihaya Nagasaki

Hotel Flags Ishihaya Nagasaki
Isahaya
Hong Kong SAR China
cat
Rp963.175
Rp1.059.503 total
23 Sept - 24 Sept
Hotel Flags Ishihaya Nagasaki

4. New Station Hotel

New Station Hotel
Isahaya
Canada
Kenji
Rp1.035.393
Rp1.138.966 total
29 Sept - 30 Sept
New Station Hotel

5. Isahaya Terminal Hotel

Isahaya Terminal Hotel
Isahaya
Japan
koujirou
Rp1.234.842
Rp1.358.338 total
23 Sept - 24 Sept
Isahaya Terminal Hotel

6. New Station Hotel Premiere

New Station Hotel Premiere
Isahaya
Australia
James
Rp1.006.817
Rp1.107.499 total
29 Sept - 30 Sept
New Station Hotel Premiere

7. Hotel Route-Inn Isahaya Inter

Hotel Route-Inn Isahaya Inter
Isahaya
Japan
?????
Rp1.528.130
Rp1.680.943 total
22 Sept - 23 Sept
Hotel Route-Inn Isahaya Inter

8. Morino Villa & Resort

Morino Villa & Resort
Isahaya
United States
Maximo
Rp1.269.692
Rp1.396.661 total
25 Sept - 26 Sept
Morino Villa & Resort

9. KIKITSU Station Hotel

KIKITSU Station Hotel
Isahaya
United Kingdom
Barb
Rp982.116
Rp1.080.328 total
24 Sept - 25 Sept
KIKITSU Station Hotel

10. Omura Station Hotel

Omura Station Hotel
Omura
Japan
Yasuhiko
Rp1.107.035
Rp1.226.015 total
4 Oct - 5 Oct
Omura Station Hotel

11. Omura Station Hotel Nagasaki Airport

Omura Station Hotel Nagasaki Airport
Omura
Singapore
Kazuhiko
Rp949.293
Rp1.044.222 total
24 Sept - 25 Sept
Omura Station Hotel Nagasaki Airport

12. Comfort Inn Nagasaki Airport

Comfort Inn Nagasaki Airport
Omura
United States
Asya
Rp823.235
Rp905.558 total
23 Sept - 24 Sept
Comfort Inn Nagasaki Airport

13. Hotel Nikko Huis Ten Bosch

Hotel Nikko Huis Ten Bosch
Sasebo
Germany
Walter
Rp2.140.410
Rp2.589.896 total
23 Sept - 24 Sept
Hotel Nikko Huis Ten Bosch

14. Fairfield By Marriott Saga Ureshino Onsen

Fairfield By Marriott Saga Ureshino Onsen
Ureshino
United Kingdom
Christopher
Rp1.324.379
Rp1.602.499 total
23 Sept - 24 Sept
Fairfield By Marriott Saga Ureshino Onsen

15. Hotel Forza Nagasaki

Hotel Forza Nagasaki
Nagasaki
Australia
Eamon
Rp874.893
Rp962.382 total
23 Sept - 24 Sept
Hotel Forza Nagasaki

16. Jisco Hotel Obama Onsen

Jisco Hotel Obama Onsen
Obama Onsen
United States
Alexander
Rp1.055.799
Rp1.195.337 total
27 Sept - 28 Sept
Jisco Hotel Obama Onsen

17. Hotel Concerto Nagasaki

Hotel Concerto Nagasaki
Nagasaki
United Kingdom
Bryony
Rp1.187.753
Rp1.306.494 total
23 Sept - 24 Sept
Hotel Concerto Nagasaki

18. Restay Nagasaki Club - Adults Only

Restay Nagasaki Club - Adults Only
Nagasaki
Taiwan
Anonymous traveller
Rp957.011
Rp1.052.712 total
23 Sept - 24 Sept
Restay Nagasaki Club - Adults Only

19. Dormy Inn Nagasakiekimae Hot Springs

Dormy Inn Nagasakiekimae Hot Springs
Nagasaki
Canada
Eiji
Rp1.440.630
Rp1.584.727 total
22 Sept - 23 Sept
Dormy Inn Nagasakiekimae Hot Springs

20. THE GLOBAL VIEW Nagasaki

THE GLOBAL VIEW Nagasaki
Nagasaki
United States
Blake
Rp926.139
Rp1.018.753 total
23 Sept - 24 Sept
THE GLOBAL VIEW Nagasaki
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Stay near popular Isahaya attractions

Isahaya Park

8.4/10 (11 reviews)
Built on ancient Isahaya Castle ruins, this park features the stunning Megane Bridge and 600-year-old camphor tree. Visit in April when thousands of azaleas transform the landscape during the annual festival.
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Kantaku no Sato

7.4/10 (3 reviews)
This educational complex showcases Isahaya Bay's reclamation history and marine life through its Kantaku Museum and Mutsugoro Aquarium. Enjoy horseback riding, boating, or a 100-meter zipline in the adventure park.
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Todoroki Fall

6.0/10 (1 review)
This 12-meter waterfall creates a thunderous roar as it cascades into crystal-clear pools below. Explore the surrounding valley's lush trails, where 30 smaller falls create a tranquil forest symphony.
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Kannonji Temple

6.0/10 (1 review)
Kannonji Temple offers a serene retreat with traditional Buddhist architecture in Isahaya City, Nagasaki. Visit in early morning to experience the peaceful grounds and cultural artefacts in contemplative solitude.
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Sazanka Herb Museum

7.0/10 (2 reviews)
This fragrant highland garden showcases a diverse collection of aromatic herbs in a serene setting. Explore the grounds, join an aroma class, or savour herbal teas at the garden café after your botanical journey.
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Konagai Culture Hall

6.0/10 (2 reviews)
This community hub hosts local events and offers a welcoming library for quiet study. Look for the whimsical fruit-shaped bus stops nearby—they make for delightful photo opportunities.
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Moriyama Folk Museum

8.0/10 (2 reviews)
Learn about the local history of Isahaya when you spend time at Moriyama Folk Museum. Discover the area's mountain views and monuments.
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Ikoinomori Takaki

Escape to Ikoinomori Takaki, a serene park where locals unwind among lush greenery in Isahaya. Bring a picnic to enjoy under the trees during spring when the natural scenery is most captivating.
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Learn more about Isahaya

Discover the ancient Isahaya Spectacles Bridge and explore Isahaya Park's cherry blossoms in spring for iconic photo opportunities. Nearby Unzen-Amakusa National Park offers volcanic hiking trails, while Isahaya's summer festivals showcase traditional dance performances and local seafood specialities.

See all hotels in Isahaya
A stone bridge over a calm river with lush greenery and clear blue sky.

Top Isahaya Hotel Reviews

Dormy Inn Nagasakiekimae Hot Springs

Dormy Inn Nagasakiekimae Hot Springs

10/10 Excellent
"My BFF and I went to explore Nagasaki Dormy never disappoints This is a premiere and we really enjoyed it…not sure of isffeeence The location was good We saw the one in Chinatown It looked similar? The room was good size for Japan Onsen was clean and excellent The breakfast was delish Love the little touches: like ice cream next to onsen A book library with a nice view and massage chairs before or after onsen! And location was central to everything we wanted to visit Bus stop, train station and trolley stop all in walking distance 7-11 attached to hotel which was convenient Staff was polite and friendly Not a lot of English but accommodating We miss it cuz it was so nice to go back to a comfy hotel at end of day and soak in Onsen!"
Grace 3-night trip
Posted 7 days ago
Dormy Inn Nagasakiekimae Hot Springs
Belleview Nagasaki Dejima

Belleview Nagasaki Dejima

10/10 Excellent
"A very friendly and wel ome staff and front desk with management care and hospitality. Lool.forward to future booking in a tranquility and peaceful hotel"
Jesus 2-night trip
Posted 13 days ago
Belleview Nagasaki Dejima
Nagasaki Marriott Hotel

Nagasaki Marriott Hotel

10/10 Excellent
"Very modern, spacious, and clean, conveniently located next to Nagasaki Station"
Winston 1-night trip
Posted 3 weeks ago
Nagasaki Marriott Hotel
FAV LUX NAGASAKI

FAV LUX NAGASAKI

10/10 Excellent
"This hotel is clean,modern and very comfortable. It made my visit to Nagasaki even better. Its close to a tram stop to access all main attractions and about 200M to Glover garden. Highly recommended"
Esslyn 2-night trip
Posted 3 weeks ago
FAV LUX NAGASAKI
Hotel Nikko Huis Ten Bosch

Hotel Nikko Huis Ten Bosch

8/10 Good
"Staff services"
Manuel 3-night trip
Posted 2 months ago
Hotel Nikko Huis Ten Bosch
Hotel Rotterdam Huis Ten Bosch

Hotel Rotterdam Huis Ten Bosch

8/10 Good
"Breakfast was limited to 1 main choice and allowed one piece of meat, either mackerel , chicken or sausage. The bread was big so we should be allowed to take more proteins. It should not restricted to 1 piece. Other than that, hotel was in a good location nearby to Huis Ten Bosch."
Ka Yee Rebecca 1-night trip
Posted 4 months ago
Hotel Rotterdam Huis Ten Bosch
Hotel Europe Huis Ten Bosch

Hotel Europe Huis Ten Bosch

10/10 Excellent
"とても良い気分で過ごすことができました。"
YASUHIRO 1-night trip
Posted 5 months ago
Hotel Europe Huis Ten Bosch

More cheap stays in Isahaya

Hotel 21

Hotel 21

8-13 Mezamemachi Nagasaki Nagasaki
Rp724.333
Rp796.766 total
24 Sept - 25 Sept
5.4/10 (14 reviews)
Hotel 21
HOTEL R9 The Yard Omura

HOTEL R9 The Yard Omura

Kuromarumachi 347-4 Omura Nagasaki
Rp836.513
Rp920.164 total
30 Sept - 1 Oct
8.8/10 Excellent! (39 reviews)
HOTEL R9 The Yard Omura
Tennen Onsen Hotel Kinshai

Tennen Onsen Hotel Kinshai

22-12 Saiwaimachi Isahaya Nagasaki
Rp1.018.753
Rp1.120.628 total
23 Sept - 24 Sept
8.2/10 Very good! (33 reviews)
Tennen Onsen Hotel Kinshai
Grand Base Nagasaki City

Grand Base Nagasaki City

2 39 Tamazonomachi Nagasaki Nagasaki Prefecture
Rp1.078.833
Rp1.186.716 total
29 Sept - 30 Sept
8.2/10 Very good! (126 reviews)
Grand Base Nagasaki City
Jisco Hotel Obama Onsen

Jisco Hotel Obama Onsen

Obamacho Minamihonmachi - 145-2 Unzen Nagasaki
Rp1.055.799
Rp1.195.337 total
27 Sept - 28 Sept
Jisco Hotel Obama Onsen
HOTEL URO - hostel

HOTEL URO - hostel

6-10 Kajiya-machi Nagasaki Nagasaki
Rp1.426.254
Rp1.568.879 total
24 Sept - 25 Sept
9/10 Wonderful! (2 reviews)
HOTEL URO - hostel

Frequently asked questions

What's the best place for a stay in Isahaya?
Based on our traveller data, New Station Hotel Premiere is one of the top choices for your stay. This hotel offers free parking and free WiFi. Tennen Onsen Hotel Kinshai is another good choice for your trip. See all available top hotels, or vacation rentals in Isahaya.
What are some of the best holiday rentals that Isahaya has to offer?
Seaside Villa N: This holiday home rental outside of Isahaya is equipped with a balcony, air conditioning and free WiFi to help you feel comfortable during your stay. Kitchen amenities include a fridge, a stovetop and a microwave. See all vacation rentals in Isahaya.
If I need to cancel my hotel reservation in Isahaya, will I receive a refund?
Yes! Most room reservations are fully refundable if cancelled prior to the accommodation's cancellation deadline, which is often 24 or 48 hours before your check-in date. If you have a non-refundable reservation, it might still be possible to cancel it and get a refund within 24 hours of your booking. Filter your search by fully refundable to find flexible hotel deals in Isahaya.
What are some accommodation options with pools in Isahaya?
STADIUM CITY HOTEL NAGASAKI: Provides a children's pool, an indoor pool and 5 restaurants. View all hotels with pools in Isahaya.
What is the best spa hotel in Isahaya?
Super Hotel Nagasaki Isahaya Natural Hot Spring is a top spa hotel with 152 rooms, free WiFi and off-street parking. Treat yourself to the hot springs at the on-site spa. See all spa hotels in Isahaya.
What's it like staying in Isahaya?
Visitors can enjoy all that Isahaya has to offer, including the parks and monuments. In Isahaya, there are 19 hotels and other accommodation options to choose from. Find out more about Isahaya.
What is there to see in Isahaya?
Landmarks like Isahaya Park, Kantaku no Sato and Megane Bridge might be worth a visit. Natural beauty is on display at Todoroki Fall, Tsukinooka Park and Ikoinomori Takaki. A couple of additional sights to add to your itinerary are Konagai Culture Hall and Moriyama Sports Community Square. Take a look at what more there is to see and do in Expedia's Isahaya guide.
What's the seasonal weather like in Isahaya?
The hottest months are usually August and July, with an average temperature of 25°C, while the coldest months are January and February, with an average of 9°C. The rainiest months in Isahaya are June, July, August and May, with each month seeing an average of 382 mm of rainfall.

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