An aerial view of a rural landscape with fields, a small town, and distant mountains.

Find hotels in Isahaya from Rp799.580

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

This weekend
13 Nov - 15 Nov
Next weekend
20 Nov - 22 Nov

Filter by

Property class

Guest rating

Selecting then applying a filter from this group will update the results on a new page

Our top choices for Isahaya hotels

A hot spring area with a view of a mountain and plants, a steam vent, and a seating area with a railing.

1. Super Hotel Nagasaki Isahaya Natural Hot Spring

Super Hotel Nagasaki Isahaya Natural Hot Spring
3.0 star property
Isahaya
10.0 out of 10, Exceptional, (1 review)
"清潔で快適でした。また利用したいと思います。 温泉があることもよかったです"
Japan
KITANO
The price is Rp1.199.202
Rp1.319.122 total
13 Dec - 14 Dec
Super Hotel Nagasaki Isahaya Natural Hot Spring
A hotel lobby with a reception desk, seating area, and large windows.

2. Hotel Route-Inn Isahaya Inter

Hotel Route-Inn Isahaya Inter
3.0 star property
Isahaya
8.2 out of 10, Very good, (303 reviews)
"Relax time so good!"
Japan
?????
The price is Rp1.533.526
Rp1.686.879 total
15 Nov - 16 Nov
Hotel Route-Inn Isahaya Inter
A multi-story building with a flat facade, balconies, and a parking lot in front.

3. Tennen Onsen Hotel Kinshai

Tennen Onsen Hotel Kinshai
2.0 star property
Isahaya
7.8 out of 10, Good, (42 reviews)
"１"
Japan
mutsuo
The price is Rp1.022.350
Rp1.124.585 total
18 Nov - 19 Nov
Tennen Onsen Hotel Kinshai
A multi-story hotel with a modern design, featuring a prominent entrance and a sign indicating it is a hotel.

4. New Station Hotel Premiere

New Station Hotel Premiere
3.0 star property
Isahaya
7.8 out of 10, Good, (191 reviews)
"Blood stain on sheets, chair broken, smokers on non-smoking floor, mattress & pillows hard as bricks, room adjacent to main road so noisy, no dining, breakfast is a cold bento box. Good shower and staff."
Australia
James
The price is Rp1.010.063
Rp1.111.069 total
23 Nov - 24 Nov
New Station Hotel Premiere
A view through a window with a view of a garden with various trees and bushes.

5. Hotel Flags Ishihaya Nagasaki

Hotel Flags Ishihaya Nagasaki
3.0 star property
Isahaya
7.8 out of 10, Good, (78 reviews)
"The breakfast was delicious. The room was dated, the furniture and carpet stained and it had a musky smell. We attended a wedding at the hotel and that was fabulous, but it seems that they only care about the wedding business and not about their hotel rooms."
Canada
Suzanne
The price is Rp836.397
Rp920.002 total
7 Dec - 8 Dec
Hotel Flags Ishihaya Nagasaki
A modern waiting area with two sofas, a coffee table, and a reception desk with computers.

6. New Station Hotel

New Station Hotel
3.0 star property
Isahaya
7.4 out of 10, Good, (126 reviews)
"Good hotel"
Canada
Kenji
The price is Rp1.084.260
Rp1.192.743 total
23 Nov - 24 Nov
New Station Hotel
A modern building entrance with a set of stairs leading to a glass door entrance.

7. Isahaya Terminal Hotel

Isahaya Terminal Hotel
2.5 star property
Isahaya
6.6 out of 10, (259 reviews)
"-"
Japan
じゅん
The price is Rp1.197.854
Rp1.317.697 total
15 Nov - 16 Nov
Isahaya Terminal Hotel
A spacious lobby with a reception desk, multiple seating areas, and a large bookshelf filled with books and decorative items.

8. KIKITSU Station Hotel

KIKITSU Station Hotel
3.0 star property
Isahaya
8.6 out of 10, Excellent, (192 reviews)
"Polite staff and clean room. The toilet and the bath/shower were in separate rooms. Overall very nice place to stay."
United Kingdom
Barb
The price is Rp992.476
Rp1.091.757 total
8 Dec - 9 Dec
KIKITSU Station Hotel
A room with a large window offering a view of a lush green landscape, a wooden table with a vase, and a curtain partially drawn.

9. Morino Villa & Resort

Morino Villa & Resort
3.0 star property
Isahaya
8.8 out of 10, Excellent, (15 reviews)
"Very Nice Clean Room and Outstanding Customer Service. Love staying, peaceful and quite!"
United States
Maximo
The price is Rp1.153.873
Rp1.269.260 total
7 Dec - 8 Dec
Morino Villa & Resort
A modern reception area with a glass partition, a reception desk, seating area, and large windows.

10. Omura Station Hotel Nagasaki Airport

Omura Station Hotel Nagasaki Airport
3.0 star property
Omura
8.6 out of 10, Excellent, (292 reviews)
"Great Value"
United States
Brent
The price is Rp1.143.175
Rp1.257.492 total
15 Nov - 16 Nov
Omura Station Hotel Nagasaki Airport
A modern kitchen with a central island, built-in shelves, and hanging pendant lights.

11. Hilton Nagasaki

Hilton Nagasaki
4.0 star property
Nagasaki
9.6 out of 10, Exceptional, (563 reviews)
"Walking distance from Nagasaki Station, Helpful staffs offer to carry luggages to the room, the room is spacious and clean"
Singapore
You Jin
The price is Rp2.118.641
Rp2.330.505 total
30 Nov - 1 Dec
Hilton Nagasaki
A hot spring surrounded by rocks and vegetation, with a wooden structure on the left and lanterns along the edge.

12. Hoshino Resorts KAI Unzen

Hoshino Resorts KAI Unzen
3.0 star property
Unzen
9.6 out of 10, Exceptional, (69 reviews)
"An absolutely stunning resort. Beautiful, super clean, wonderful helpful staff and delicious food!"
United States
Gabrielle
The price is Rp6.662.319
Rp7.362.629 total
7 Dec - 8 Dec
Hoshino Resorts KAI Unzen
A modern building with a glass-enclosed swimming pool and a view of the water.

13. Candeo Hotels Nagasaki Shinchi Chinatown

Candeo Hotels Nagasaki Shinchi Chinatown
3.5 star property
Nagasaki Chinatown
9.0 out of 10, Wonderful, (897 reviews)
"Beautiful hotel and onsen, loved our stay"
Canada
Chloe
The price is Rp1.536.624
Rp1.724.364 total
23 Nov - 24 Nov
Candeo Hotels Nagasaki Shinchi Chinatown
A buffet with a variety of food items, a seating area with chairs, and a view of the city through large windows.

14. THE GLOBAL VIEW Nagasaki

THE GLOBAL VIEW Nagasaki
4.0 star property
Nagasaki
9.4 out of 10, Exceptional, (665 reviews)
"Great location!"
United States
Kimberly
The price is Rp1.338.350
Rp1.472.185 total
23 Nov - 24 Nov
THE GLOBAL VIEW Nagasaki
Exterior

15. Hotel Indigo Nagasaki Glover Street by IHG

Hotel Indigo Nagasaki Glover Street by IHG
4.5 star property
Nagasaki
9.8 out of 10, Exceptional, (56 reviews)
"Beautiful - from the decor to the gardens, customer service, and dining experience. Impeccable."
Australia
Kelly
The price is Rp2.778.177
Rp3.453.274 total
13 Dec - 14 Dec
Hotel Indigo Nagasaki Glover Street by IHG
A koi pond with a stone edge, surrounded by lush greenery and a wooden fence.

16. Dormy Inn Nagasakiekimae Hot Springs

Dormy Inn Nagasakiekimae Hot Springs
3.0 star property
Nagasaki
9.4 out of 10, Exceptional, (1,001 reviews)
"Hot bath at the top floor is amazing! Breakfast spread was huge and the food was delicious. There's also free ramen for supper."
Singapore
Weizhuang
The price is Rp1.391.809
Rp1.587.881 total
26 Nov - 27 Nov
Dormy Inn Nagasakiekimae Hot Springs
The entrance to Omura Central Hotel with a glass facade, a red carpet, and bicycles parked outside.

17. Omura Central Hotel

Omura Central Hotel
3.0 star property
Omura
7.6 out of 10, Good, (83 reviews)
"Little bit on the basic side. But for that money it was great. Next to the hotel a great beef restaurant."
Ireland
Jan
The price is Rp1.489.614
Rp1.638.576 total
29 Nov - 30 Nov
Omura Central Hotel
Exterior

18. Comfort Inn Nagasaki Airport

Comfort Inn Nagasaki Airport
3.0 star property
Omura
8.4 out of 10, Very good, (452 reviews)
"Nice little last minute place to stay. "
United States
Asya
The price is Rp858.605
Rp944.522 total
29 Nov - 30 Nov
Comfort Inn Nagasaki Airport
A modern hotel lobby with white leather sofas, a coffee table, and potted plants.

19. Omura Station Hotel

Omura Station Hotel
3.0 star property
Omura
8.2 out of 10, Very good, (155 reviews)
"Good location and clean. "
Japan
Yasuhiko
The price is Rp1.177.253
Rp1.294.978 total
15 Nov - 16 Nov
Omura Station Hotel
A modern living room with a large window, a sofa set, and a coffee table.

20. Nagasaki Marriott Hotel

Nagasaki Marriott Hotel
5.0 star property
Nagasaki
9.6 out of 10, Exceptional, (322 reviews)
"Hotel is just outside Nagasaki train station and has a shopping mall next door. It's so convenient. Hotel is new and clean."
Singapore
Chee Hong
The price is Rp2.044.702
Rp2.586.548 total
29 Nov - 30 Nov
Nagasaki Marriott Hotel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Hotels recommended for families in Isahaya

A multi-story building with a flat facade, balconies, and a parking lot in front.

Tennen Onsen Hotel Kinshai

Tennen Onsen Hotel Kinshai
2.0 star property
Isahaya
7.8 out of 10, Good, (42)
The price is Rp1.022.350
Rp1.124.585 total
19 Nov - 20 Nov
Tennen Onsen Hotel Kinshai
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Stay near popular Isahaya attractions

Isahaya Park

8.4/10 (11 reviews)
Built on ancient Isahaya Castle ruins, this park features the stunning Megane Bridge and 600-year-old camphor tree. Visit in April when thousands of azaleas transform the landscape during the annual festival.
See properties

Learn more about Isahaya

Discover the ancient Isahaya Spectacles Bridge and explore Isahaya Park's cherry blossoms in spring for iconic photo opportunities. Nearby Unzen-Amakusa National Park offers volcanic hiking trails, while Isahaya's summer festivals showcase traditional dance performances and local seafood specialities.

See all hotels in Isahaya
A stone bridge over a calm river with lush greenery and clear blue sky.

Top Isahaya Hotel Reviews

Dormy Inn Nagasakiekimae Hot Springs

Dormy Inn Nagasakiekimae Hot Springs

10/10 Excellent
"Everything is well set up and clean. Loved the onsen! Close to the station and easy access to attractions."
NOBUO 1-night trip
Posted less than an hour ago
Dormy Inn Nagasakiekimae Hot Springs

More cheap stays in Isahaya

Hotel 21

Hotel 21

8-13 Mezamemachi Nagasaki Nagasaki
The price is Rp726.891 per night from 26 Nov to 27 Nov
Rp726.891
Rp799.580 total
26 Nov - 27 Nov
5/10 (18 reviews)

Frequently asked questions

What's the best place for a stay in Isahaya?
Based on our traveller data, New Station Hotel Premiere is one of the top choices for your stay. This hotel offers free parking and free WiFi. Tennen Onsen Hotel Kinshai is another good choice for your trip. See all available top hotels, or vacation rentals in Isahaya.
What are some of the best holiday rentals that Isahaya has to offer?
Rakuten STAY HOUSE x WILLSTYLE SASEBO: This holiday home rental outside of Isahaya has air conditioning and laundry facilities to help you feel perfectly comfortable in your new surroundings. Kitchen amenities include a fridge, a stovetop and a microwave. See all vacation rentals in Isahaya.
If I need to cancel my hotel reservation in Isahaya, will I receive a refund?
Yes! Most room reservations are fully refundable if cancelled prior to the accommodation's cancellation deadline, which is often 24 or 48 hours before your check-in date. If you have a non-refundable reservation, it might still be possible to cancel it and get a refund within 24 hours of your booking. Filter your search by fully refundable to find flexible hotel deals in Isahaya.
What are some accommodation options with pools in Isahaya?
STADIUM CITY HOTEL NAGASAKI: Provides a children's pool, an indoor pool and 5 restaurants. View all hotels with pools in Isahaya.
What is the best spa hotel in Isahaya?
Super Hotel Nagasaki Isahaya Natural Hot Spring is a top spa hotel with 152 rooms, free WiFi and off-street parking. Treat yourself to the hot springs at the on-site spa. See all spa hotels in Isahaya.
What's it like staying in Isahaya?
Visitors can enjoy all that Isahaya has to offer, including the parks and monuments. In Isahaya, there are 19 hotels and other accommodation options to choose from. Find out more about Isahaya.
What is there to see in Isahaya?
Landmarks like Isahaya Park, Kantaku no Sato and Megane Bridge might be worth a visit. Natural beauty is on display at Tsukinooka Park, Ikoinomori Takaki and Todoroki Fall. A couple of additional sights to add to your itinerary are Konagai Culture Hall and Sazanka Herb Museum. Take a look at what more there is to see and do in Expedia's Isahaya guide.
What's the seasonal weather like in Isahaya?
The hottest months are usually August and July, with an average temperature of 25°C, while the coldest months are January and February, with an average of 9°C. The rainiest months in Isahaya are June, July, August and May, with each month seeing an average of 382 mm of rainfall.

Explore a world of travel with Expedia