An aerial view of a rural landscape with fields, a small town, and distant mountains.

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Check prices for these dates

Tonight
16 Sept - 17 Sept
Tomorrow
17 Sept - 18 Sept
This weekend
18 Sept - 20 Sept
Next weekend
25 Sept - 27 Sept

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Our top choices for Isahaya hotels

1. Tennen Onsen Hotel Kinshai

Tennen Onsen Hotel Kinshai
Isahaya
Japan
HIROKI
Rp1.030.930
Rp1.134.023 total
16 Sept - 17 Sept
Tennen Onsen Hotel Kinshai

2. Super Hotel Nagasaki Isahaya Natural Hot Spring

Super Hotel Nagasaki Isahaya Natural Hot Spring
Isahaya
Japan
KITANO
Rp1.218.331
Rp1.340.209 total
27 Sept - 28 Sept
Super Hotel Nagasaki Isahaya Natural Hot Spring

3. Hotel Flags Ishihaya Nagasaki

Hotel Flags Ishihaya Nagasaki
Isahaya
Hong Kong SAR China
cat
Rp1.262.088
Rp1.388.319 total
23 Sept - 24 Sept
Hotel Flags Ishihaya Nagasaki

4. New Station Hotel

New Station Hotel
Isahaya
Canada
Kenji
Rp1.051.757
Rp1.156.933 total
23 Sept - 24 Sept
New Station Hotel

5. Isahaya Terminal Hotel

Isahaya Terminal Hotel
Isahaya
Japan
koujirou
Rp1.207.907
Rp1.328.755 total
16 Sept - 17 Sept
Isahaya Terminal Hotel

6. New Station Hotel Premiere

New Station Hotel Premiere
Isahaya
Australia
James
Rp1.020.616
Rp1.122.678 total
15 Oct - 16 Oct
New Station Hotel Premiere

7. Hotel Route-Inn Isahaya Inter

Hotel Route-Inn Isahaya Inter
Isahaya
Japan
?????
Rp1.386.722
Rp1.535.761 total
29 Sept - 30 Sept
Hotel Route-Inn Isahaya Inter

8. Morino Villa & Resort

Morino Villa & Resort
Isahaya
United States
Maximo
Rp1.261.518
Rp1.387.670 total
17 Sept - 18 Sept
Morino Villa & Resort

9. KIKITSU Station Hotel

KIKITSU Station Hotel
Isahaya
United Kingdom
Barb
Rp999.430
Rp1.099.430 total
5 Oct - 6 Oct
KIKITSU Station Hotel

10. Omura Station Hotel Nagasaki Airport

Omura Station Hotel Nagasaki Airport
Omura
Singapore
Kazuhiko
Rp960.640
Rp1.056.704 total
17 Sept - 18 Sept
Omura Station Hotel Nagasaki Airport

11. Omura Station Hotel

Omura Station Hotel
Omura
Japan
Yasuhiko
Rp1.120.267
Rp1.240.669 total
29 Sept - 30 Sept
Omura Station Hotel

12. Jisco Hotel Obama Onsen

Jisco Hotel Obama Onsen
Obama Onsen
United States
Alexander
Rp1.068.419
Rp1.209.625 total
25 Sept - 26 Sept
Jisco Hotel Obama Onsen

13. Comfort Inn Nagasaki Airport

Comfort Inn Nagasaki Airport
Omura
United States
Asya
Rp833.075
Rp916.382 total
27 Sept - 28 Sept
Comfort Inn Nagasaki Airport

14. Fairfield By Marriott Saga Ureshino Onsen

Fairfield By Marriott Saga Ureshino Onsen
Ureshino
United Kingdom
Christopher
Rp1.340.209
Rp1.621.653 total
16 Sept - 17 Sept
Fairfield By Marriott Saga Ureshino Onsen

15. Omura Central Hotel

Omura Central Hotel
Omura
Ireland
Jan
Rp1.563.303
Rp1.719.633 total
25 Sept - 26 Sept
Omura Central Hotel

16. Restay Nagasaki Club - Adults Only

Restay Nagasaki Club - Adults Only
Nagasaki
Taiwan
Anonymous traveller
Rp968.450
Rp1.065.295 total
24 Sept - 25 Sept
Restay Nagasaki Club - Adults Only

17. Hotel Nikko Huis Ten Bosch

Hotel Nikko Huis Ten Bosch
Sasebo
Germany
Walter
Rp2.165.995
Rp2.620.853 total
16 Sept - 17 Sept
Hotel Nikko Huis Ten Bosch

18. Crowne Plaza ANA Nagasaki Gloverhill by IHG

Crowne Plaza ANA Nagasaki Gloverhill by IHG
Nagasaki
France
Shazad
Rp766.783
Rp1.557.736 total
27 Sept - 28 Sept
Crowne Plaza ANA Nagasaki Gloverhill by IHG

19. HOTEL R9 The Yard Omura

HOTEL R9 The Yard Omura
Omura
Hong Kong SAR China
Tsz Kin
Rp717.384
Rp789.122 total
23 Sept - 24 Sept
HOTEL R9 The Yard Omura

20. Hotel Forza Nagasaki

Hotel Forza Nagasaki
Nagasaki
Australia
Eamon
Rp936.793
Rp1.030.472 total
27 Sept - 28 Sept
Hotel Forza Nagasaki
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Stay near popular Isahaya attractions

Isahaya Park

8.4/10 (11 reviews)
Built on ancient Isahaya Castle ruins, this park features the stunning Megane Bridge and 600-year-old camphor tree. Visit in April when thousands of azaleas transform the landscape during the annual festival.
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Kantaku no Sato

7.4/10 (3 reviews)
This educational complex showcases Isahaya Bay's reclamation history and marine life through its Kantaku Museum and Mutsugoro Aquarium. Enjoy horseback riding, boating, or a 100-meter zipline in the adventure park.
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Todoroki Fall

6.0/10 (1 review)
This 12-meter waterfall creates a thunderous roar as it cascades into crystal-clear pools below. Explore the surrounding valley's lush trails, where 30 smaller falls create a tranquil forest symphony.
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Kannonji Temple

6.0/10 (1 review)
Kannonji Temple offers a serene retreat with traditional Buddhist architecture in Isahaya City, Nagasaki. Visit in early morning to experience the peaceful grounds and cultural artefacts in contemplative solitude.
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Konagai Culture Hall

6.0/10 (2 reviews)
This community hub hosts local events and offers a welcoming library for quiet study. Look for the whimsical fruit-shaped bus stops nearby—they make for delightful photo opportunities.
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Sazanka Herb Museum

7.0/10 (2 reviews)
This fragrant highland garden showcases a diverse collection of aromatic herbs in a serene setting. Explore the grounds, join an aroma class, or savour herbal teas at the garden café after your botanical journey.
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Ikoinomori Takaki

Escape to Ikoinomori Takaki, a serene park where locals unwind among lush greenery in Isahaya. Bring a picnic to enjoy under the trees during spring when the natural scenery is most captivating.
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Moriyama Sports Community Square

This modern community centre serves as a local sports hub for Isahaya residents. Visitors can observe authentic Japanese community life while enjoying the well-maintained athletic facilities.
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Learn more about Isahaya

Discover the ancient Isahaya Spectacles Bridge and explore Isahaya Park's cherry blossoms in spring for iconic photo opportunities. Nearby Unzen-Amakusa National Park offers volcanic hiking trails, while Isahaya's summer festivals showcase traditional dance performances and local seafood specialities.

See all hotels in Isahaya
A stone bridge over a calm river with lush greenery and clear blue sky.

Top Isahaya Hotel Reviews

Dormy Inn Nagasakiekimae Hot Springs

Dormy Inn Nagasakiekimae Hot Springs

10/10 Excellent
"My BFF and I went to explore Nagasaki Dormy never disappoints This is a premiere and we really enjoyed it…not sure of isffeeence The location was good We saw the one in Chinatown It looked similar? The room was good size for Japan Onsen was clean and excellent The breakfast was delish Love the little touches: like ice cream next to onsen A book library with a nice view and massage chairs before or after onsen! And location was central to everything we wanted to visit Bus stop, train station and trolley stop all in walking distance 7-11 attached to hotel which was convenient Staff was polite and friendly Not a lot of English but accommodating We miss it cuz it was so nice to go back to a comfy hotel at end of day and soak in Onsen!"
Grace 3-night trip
Posted 2 days ago
Dormy Inn Nagasakiekimae Hot Springs
Belleview Nagasaki Dejima

Belleview Nagasaki Dejima

10/10 Excellent
"A very friendly and wel ome staff and front desk with management care and hospitality. Lool.forward to future booking in a tranquility and peaceful hotel"
Jesus 2-night trip
Posted 8 days ago
Belleview Nagasaki Dejima
Hotel Okura JR Huis Ten Bosch

Hotel Okura JR Huis Ten Bosch

10/10 Excellent
"Good location, nice view, had shuttle boat service to the park"
John Hock Kee 1-night trip
Posted 9 days ago
Hotel Okura JR Huis Ten Bosch
Nagasaki Marriott Hotel

Nagasaki Marriott Hotel

10/10 Excellent
"Very modern, spacious, and clean, conveniently located next to Nagasaki Station"
Winston 1-night trip
Posted 2 weeks ago
Nagasaki Marriott Hotel
FAV LUX NAGASAKI

FAV LUX NAGASAKI

10/10 Excellent
"This hotel is clean,modern and very comfortable. It made my visit to Nagasaki even better. Its close to a tram stop to access all main attractions and about 200M to Glover garden. Highly recommended"
Esslyn 2-night trip
Posted 2 weeks ago
FAV LUX NAGASAKI
Hotel Nikko Huis Ten Bosch

Hotel Nikko Huis Ten Bosch

8/10 Good
"Staff services"
Manuel 3-night trip
Posted 2 months ago
Hotel Nikko Huis Ten Bosch
Hotel Rotterdam Huis Ten Bosch

Hotel Rotterdam Huis Ten Bosch

8/10 Good
"Breakfast was limited to 1 main choice and allowed one piece of meat, either mackerel , chicken or sausage. The bread was big so we should be allowed to take more proteins. It should not restricted to 1 piece. Other than that, hotel was in a good location nearby to Huis Ten Bosch."
Ka Yee Rebecca 1-night trip
Posted 3 months ago
Hotel Rotterdam Huis Ten Bosch
Hotel Europe Huis Ten Bosch

Hotel Europe Huis Ten Bosch

10/10 Excellent
"とても良い気分で過ごすことができました。"
YASUHIRO 1-night trip
Posted 5 months ago
Hotel Europe Huis Ten Bosch

More cheap stays in Isahaya

Hotel 21

Hotel 21

8-13 Mezamemachi Nagasaki Nagasaki
Rp711.961
Rp783.157 total
16 Sept - 17 Sept
5.4/10 (14 reviews)
Hotel 21
HOTEL R9 The Yard Omura

HOTEL R9 The Yard Omura

Kuromarumachi 347-4 Omura Nagasaki
Rp717.384
Rp789.122 total
23 Sept - 24 Sept
8.8/10 Excellent! (39 reviews)
HOTEL R9 The Yard Omura
Tennen Onsen Hotel Kinshai

Tennen Onsen Hotel Kinshai

22-12 Saiwaimachi Isahaya Nagasaki
Rp1.030.930
Rp1.134.023 total
16 Sept - 17 Sept
8.2/10 Very good! (32 reviews)
Tennen Onsen Hotel Kinshai
Jisco Hotel Obama Onsen

Jisco Hotel Obama Onsen

Obamacho Minamihonmachi - 145-2 Unzen Nagasaki
Rp1.068.419
Rp1.209.625 total
25 Sept - 26 Sept
Jisco Hotel Obama Onsen
Grand Base Nagasaki City

Grand Base Nagasaki City

2 39 Tamazonomachi Nagasaki Nagasaki Prefecture
Rp1.190.545
Rp1.309.599 total
16 Sept - 17 Sept
8.2/10 Very good! (125 reviews)
Grand Base Nagasaki City
HOTEL URO - hostel

HOTEL URO - hostel

6-10 Kajiya-machi Nagasaki Nagasaki
Rp1.480.829
Rp1.628.912 total
16 Sept - 17 Sept
9/10 Wonderful! (2 reviews)
HOTEL URO - hostel

Frequently asked questions

What's the best place for a stay in Isahaya?
Based on our traveller data, New Station Hotel Premiere is one of the top choices for your stay. This hotel offers free parking and free WiFi. Tennen Onsen Hotel Kinshai is another good choice for your trip. See all available top hotels, or vacation rentals in Isahaya.
What are some of the best holiday rentals that Isahaya has to offer?
Seaside Villa N: This holiday home rental outside of Isahaya is equipped with a balcony, air conditioning and free WiFi to help you feel comfortable during your stay. Kitchen amenities include a fridge, a stovetop and a microwave. See all vacation rentals in Isahaya.
If I need to cancel my hotel reservation in Isahaya, will I receive a refund?
Yes! Most room reservations are fully refundable if cancelled prior to the accommodation's cancellation deadline, which is often 24 or 48 hours before your check-in date. If you have a non-refundable reservation, it might still be possible to cancel it and get a refund within 24 hours of your booking. Filter your search by fully refundable to find flexible hotel deals in Isahaya.
What are some accommodation options with pools in Isahaya?
STADIUM CITY HOTEL NAGASAKI: Provides a children's pool, an indoor pool and 5 restaurants. View all hotels with pools in Isahaya.
What is the best spa hotel in Isahaya?
Super Hotel Nagasaki Isahaya Natural Hot Spring is a top spa hotel with 152 rooms, free WiFi and off-street parking. Treat yourself to the hot springs at the on-site spa. See all spa hotels in Isahaya.
What's it like staying in Isahaya?
Visitors can enjoy all that Isahaya has to offer, including the parks and monuments. In Isahaya, there are 19 hotels and other accommodation options to choose from. Find out more about Isahaya.
What is there to see in Isahaya?
Landmarks like Isahaya Park, Kantaku no Sato and Megane Bridge might be worth a visit. Natural beauty is on display at Todoroki Fall, Tsukinooka Park and Ikoinomori Takaki. A couple of additional sights to add to your itinerary are Konagai Culture Hall and Moriyama Sports Community Square. Take a look at what more there is to see and do in Expedia's Isahaya guide.
What's the seasonal weather like in Isahaya?
The hottest months are usually August and July, with an average temperature of 25°C, while the coldest months are January and February, with an average of 9°C. The rainiest months in Isahaya are June, July, August and May, with each month seeing an average of 382 mm of rainfall.

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