A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

Search Aparthotels in San Juan Island

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

In two weeks
4 Sept - 6 Sept
In two months
16 Oct - 18 Oct
In three months
13 Nov - 15 Nov
In four months
11 Dec - 13 Dec
No exact matches found, but these alternatives could be just right

Recommended hotels in San Juan Island

A motel with a row of rooms, a parking lot, and blooming flowers in the foreground.

1. The Orca Inn

The Orca Inn
2.0 star property
Friday Harbor
8.2 out of 10, Very good, (87 reviews)
"Clean room Fast easy check in Nice friendly staff"
United States
Lydia
The price is Rp2.149.662
Rp2.378.600 total
includes taxes & fees
30 Aug - 31 Aug
The Orca Inn
A building with a covered outdoor area, red doors, and hanging flower baskets.

2. Discovery Inn

Discovery Inn
2.0 star property
Friday Harbor
10.0 out of 10, Exceptional, (36 reviews)
"Good place. Good people. Bit of a walk to town."
United States
Paul
The price is Rp4.283.717
Rp4.739.933 total
includes taxes & fees
10 Sept - 11 Sept
Discovery Inn
A living room with a sofa, armchairs, a coffee table, and a fireplace.

3. Earthbox Inn & Spa

Earthbox Inn & Spa
3.0 star property
Friday Harbor
8.8 out of 10, Excellent, (1,002 reviews)
"Very nice and cozy place to stay."
United States
Nicole
The price is Rp4.600.440
Rp5.090.387 total
includes taxes & fees
7 Sept - 8 Sept
Earthbox Inn & Spa
A serene outdoor seating area with a table and chairs, surrounded by lush greenery and a tree.

4. Trumpeter Inn

Trumpeter Inn
3.0 star property
Friday Harbor
10.0 out of 10, Exceptional, (273 reviews)
"The place was beautiful and quite. Claudia was an amazing host."
United States
Angela
The price is Rp5.016.249
Rp5.535.391 total
includes taxes & fees
1 Sept - 2 Sept
Trumpeter Inn
A marina with boats, a cruise ship, and a forested island.

5. Bird Rock Hotel

Bird Rock Hotel
2.0 star property
Friday Harbor
8.8 out of 10, Excellent, (388 reviews)
"Perfect location near the ferry landing and in the heart of town. Next time I will request an upstairs room."
United States
Gloria
The price is Rp3.450.330
Rp3.818.011 total
includes taxes & fees
26 Aug - 27 Aug
Bird Rock Hotel
A modern interior with sofas, a table, and hanging plants.

6. Friday Harbor Suites

Friday Harbor Suites
2.5 star property
Friday Harbor
8.6 out of 10, Excellent, (1,007 reviews)
"Great location close to attractions"
United States
Ken
The price is Rp4.118.278
Rp4.556.874 total
includes taxes & fees
20 Sept - 21 Sept
Friday Harbor Suites
A marina with boats docked in a structured layout, surrounded by water and a distant cityscape.

7. Roche Harbor Resort

Roche Harbor Resort
3.0 star property
Friday Harbor
9.2 out of 10, Wonderful, (449 reviews)
"Hotel was lovely, highly recommend."
United States
Nicco
The price is Rp4.570.360
Rp5.295.562 total
includes taxes & fees
21 Sept - 22 Sept
Roche Harbor Resort
A wooden cabin interior with a dining table, chairs, and a bench.

8. Snug Harbor Resort

Snug Harbor Resort
2.5 star property
Friday Harbor
9.8 out of 10, Exceptional, (532 reviews)
"A beautiful cabin on the water with everything needed for our stay. Kayaks and paddle boards, crab pots for catching , cleaning table and pots to boil them. Picnic tables, fire pits, yard games, and chairs to use. This family oriented resort was perfect for us!"
United States
Sarah
The price is Rp7.059.906
Rp7.790.668 total
includes taxes & fees
7 Sept - 8 Sept
Snug Harbor Resort
Two people relaxing by a fire pit with a view of a harbor and a large ship.

9. Friday Harbor House

Friday Harbor House
3.5 star property
Friday Harbor
9.6 out of 10, Exceptional, (280 reviews)
"Great location and beautiful back yard to watch the harbor from!"
United States
Robert
The price is Rp8.105.621
Rp8.968.870 total
includes taxes & fees
16 Sept - 17 Sept
Friday Harbor House
A two-story house with a front porch, a picket fence, and a small garden area.

10. Tucker House Inn

Tucker House Inn
4.0 star property
Friday Harbor
9.2 out of 10, Wonderful, (297 reviews)
"A great place to stay. I highly recommend!"
United States
ZACHARY
The price is Rp4.495.338
Rp4.973.960 total
includes taxes & fees
8 Sept - 9 Sept
Tucker House Inn
A two-story building with a covered porch, surrounded by a variety of flowering plants.

11. Friday Harbor Grand B&B

Friday Harbor Grand B&B
3.0 star property
Friday Harbor
9.6 out of 10, Exceptional, (146 reviews)
"Wonderful experience! Inn owner treats his guests with superb hospitality, delicious and fresh breakfasts and enjoyable evenings filled with his talented piano playing."
United States
Amy
The price is Rp6.555.627
Rp7.253.801 total
includes taxes & fees
1 Sept - 2 Sept
Friday Harbor Grand B&B
A room with a sloped ceiling and large windows offering a view of a rural landscape.

12. Saturn's Return

Saturn's Return
2.0 star property
Friday Harbor
9.2 out of 10, Wonderful, (29 reviews)
"Family owned bed-and-breakfast/working farm with simple but very comfortable accommodations. Owner hosts were very engaging and attentive and engaging making themselves available to answer any questions. Taking hiking trails in this incredibly peaceful setting was an unexpected highlight."
United States
Margaret
The price is Rp6.664.445
Rp7.354.215 total
includes taxes & fees
23 Sept - 24 Sept
Saturn's Return
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Top San Juan Island Hotel Reviews

Anacortes Inn

Anacortes Inn

10/10 Excellent
"Such a cute place, perfect for one night! Tye young lady that checked us in after 3 pm very nice and helpful! Would stay again!"
Toni 1-night trip
Posted 1 hour ago
Anacortes Inn

Find out more about San Juan Island

San Juan Island Aparthotels information

Number of reviews
3,519
Accommodation
0 Aparthotels
Lowest Price
Rp2.378.600
Highest Price
Rp8.968.870